Uses of Interface
org.colomoto.biolqm.Service

Packages that use Service

Package	Description
org.colomoto.biolqm.modifier
org.colomoto.biolqm.modifier.booleanize	Construct Boolean versions of Multi-valued models
org.colomoto.biolqm.modifier.perturbation	Perturbation of logical models: local modifications of its logical functions.
org.colomoto.biolqm.modifier.reduction	model modification: remove components from the core.
org.colomoto.biolqm.modifier.reverse	model modification: creates a new model capable of generating the reverse dynamics.
org.colomoto.biolqm.modifier.subspace
org.colomoto.biolqm.tool	Tool definition, used to run actions from the command-line interface.
org.colomoto.biolqm.tool.attractor	Identification of the stable states of a logical model.
org.colomoto.biolqm.tool.stablestate	Identification of the stable states of a logical model.
org.colomoto.biolqm.tool.trapspaces

Uses of Service in org.colomoto.biolqm.modifier

Subinterfaces of Service in org.colomoto.biolqm.modifier

Modifier and Type	Interface and Description
interface	ModelModifierService A service providing modifiers for logical models.

Classes in org.colomoto.biolqm.modifier that implement Service

Modifier and Type	Class and Description
class	AbstractModelModifierService A base class handling service discovery for model modifier services.

Uses of Service in org.colomoto.biolqm.modifier.booleanize

Classes in org.colomoto.biolqm.modifier.booleanize that implement Service

Modifier and Type	Class and Description
class	ModelBooleanizerService A service for model booleanization.

Uses of Service in org.colomoto.biolqm.modifier.perturbation

Classes in org.colomoto.biolqm.modifier.perturbation that implement Service

Modifier and Type	Class and Description
class	PerturbationService Service to apply perturbations to Logical Models.

Uses of Service in org.colomoto.biolqm.modifier.reduction

Classes in org.colomoto.biolqm.modifier.reduction that implement Service

Modifier and Type	Class and Description
class	ModelReductionService Orchestrator for model reduction tools

Uses of Service in org.colomoto.biolqm.modifier.reverse

Classes in org.colomoto.biolqm.modifier.reverse that implement Service

Modifier and Type	Class and Description
class	ModelReverserService Wrap the reverser code into the ModelModifier interface.

Uses of Service in org.colomoto.biolqm.modifier.subspace

Classes in org.colomoto.biolqm.modifier.subspace that implement Service

Modifier and Type	Class and Description
class	SubSpaceService Modifier Service for subspace restriction

Uses of Service in org.colomoto.biolqm.tool

Subinterfaces of Service in org.colomoto.biolqm.tool

Modifier and Type	Interface and Description
interface	LogicalModelTool<R,S> Simple tool description interface.

Classes in org.colomoto.biolqm.tool that implement Service

Modifier and Type	Class and Description
class	AbstractTool<R,S> Base class for the boring parts of tool declaration classes.

Uses of Service in org.colomoto.biolqm.tool.attractor

Classes in org.colomoto.biolqm.tool.attractor that implement Service

Modifier and Type	Class and Description
class	AttractorTool Identification of synchronous attractors using a SAT solver, as proposed by E.

Uses of Service in org.colomoto.biolqm.tool.stablestate

Classes in org.colomoto.biolqm.tool.stablestate that implement Service

Modifier and Type	Class and Description
class	StableJBDD
class	StableStateTool

Uses of Service in org.colomoto.biolqm.tool.trapspaces

Classes in org.colomoto.biolqm.tool.trapspaces that implement Service

Modifier and Type	Class and Description
class	TrapSpaceTool