Uses of Interface
org.colomoto.biolqm.modifier.ModelModifier

Packages that use ModelModifier

Package	Description
org.colomoto.biolqm.modifier
org.colomoto.biolqm.modifier.booleanize	Construct Boolean versions of Multi-valued models
org.colomoto.biolqm.modifier.perturbation	Perturbation of logical models: local modifications of its logical functions.
org.colomoto.biolqm.modifier.reduction	model modification: remove components from the core.
org.colomoto.biolqm.modifier.reverse	model modification: creates a new model capable of generating the reverse dynamics.
org.colomoto.biolqm.modifier.subspace

Uses of ModelModifier in org.colomoto.biolqm.modifier

Methods in org.colomoto.biolqm.modifier that return ModelModifier

Modifier and Type	Method and Description
ModelModifier	ModelModifierService.getModifier(LogicalModel model, String parameters) Setup a new modifier object.

Uses of ModelModifier in org.colomoto.biolqm.modifier.booleanize

Methods in org.colomoto.biolqm.modifier.booleanize that return ModelModifier

Modifier and Type	Method and Description
ModelModifier	ModelBooleanizerService.getModifier(LogicalModel model)
ModelModifier	ModelBooleanizerService.getModifier(LogicalModel model, String parameters)

Uses of ModelModifier in org.colomoto.biolqm.modifier.perturbation

Classes in org.colomoto.biolqm.modifier.perturbation that implement ModelModifier

Modifier and Type	Class and Description
class	PerturbationModifier

Methods in org.colomoto.biolqm.modifier.perturbation that return ModelModifier

Modifier and Type	Method and Description
ModelModifier	PerturbationService.getModifier(LogicalModel model, String parameters)

Uses of ModelModifier in org.colomoto.biolqm.modifier.reduction

Classes in org.colomoto.biolqm.modifier.reduction that implement ModelModifier

Modifier and Type	Class and Description
class	ReductionModifier

Methods in org.colomoto.biolqm.modifier.reduction that return ModelModifier

Modifier and Type	Method and Description
ModelModifier	ModelReductionService.getModifier(LogicalModel model, ReductionSettings settings)
ModelModifier	ModelReductionService.getModifier(LogicalModel model, String parameters)

Uses of ModelModifier in org.colomoto.biolqm.modifier.reverse

Classes in org.colomoto.biolqm.modifier.reverse that implement ModelModifier

Modifier and Type	Class and Description
class	ModelReverser Wrap ReverseOperation to properly create a new model capable of generating the reverse dynamics.

Methods in org.colomoto.biolqm.modifier.reverse that return ModelModifier

Modifier and Type	Method and Description
ModelModifier	ModelReverserService.getModifier(LogicalModel model) Shorthand to retrieve a modifier without requiring a parameter String.
ModelModifier	ModelReverserService.getModifier(LogicalModel model, String parameters)

Uses of ModelModifier in org.colomoto.biolqm.modifier.subspace

Classes in org.colomoto.biolqm.modifier.subspace that implement ModelModifier

Modifier and Type	Class and Description
class	SubSpaceRestriction Model Modifier to restrict a model into a subspace.

Methods in org.colomoto.biolqm.modifier.subspace that return ModelModifier

Modifier and Type	Method and Description
ModelModifier	SubSpaceService.getModifier(LogicalModel model, String parameters)