Install and Run

bioLQM is freely available without guarantees. The source code is available on (https://github.com/colomoto/bioLQM). bioLQM is currently under development, official binaries are not yet available.

bioLQM requires Java 7. You can obtain Java for Linux, Windows, or Solaris at java.com, and Apple provides its own Java version for mac users.

BioLQM uses the maven project manager: use mvn package to build. Maven downloads all requirements and generates the target folder containing the jar file along with a lib folder for dependencies.

The JAVA virtual machine provide many options of its own, for large models, bioLQM could mostly benefit from extending the amount of memory available, with the -Xmx option. For example, one can launch bioLQM with 1000MB of memory using java -Xmm1000M -jar bioLQM-#version.jar.

for more details, see the java tools documentation